U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PPARGC1B PPARG coactivator 1 beta [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

Gene ID: 112395181, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
PPARGC1B
Gene description
PPARG coactivator 1 beta
Gene type
protein coding
RefSeq status
MODEL
Organism
Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020172589.1 (232829..339642, complement)

NW_020172589.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 26 member 2 Neighboring gene phosphodiesterase 6A Neighboring gene Rho guanine nucleotide exchange factor 37 Neighboring gene U6 spliceosomal RNA Neighboring gene casein kinase 1 alpha 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_020172589 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
peroxisome proliferator-activated receptor gamma coactivator 1-beta

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Genomic

  1. NW_020172589.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Range
    232829..339642 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024738240.1 → XP_024594008.1  peroxisome proliferator-activated receptor gamma coactivator 1-beta isoform X1

    UniProtKB/TrEMBL
    A0A341AWT5
    Conserved Domains (1) summary
    cd12356
    Location:896 → 975
    RRM_PPARGC1B; RNA recognition motif in peroxisome proliferator-activated receptor gamma coactivator 1-beta (PGC-1-beta) and similar proteins

  2. XM_024738241.1 → XP_024594009.1  peroxisome proliferator-activated receptor gamma coactivator 1-beta isoform X2

    UniProtKB/TrEMBL
    A0A341AVK7
    Conserved Domains (1) summary
    cd12356
    Location:701 → 780
    RRM_PPARGC1B; RNA recognition motif in peroxisome proliferator-activated receptor gamma coactivator 1-beta (PGC-1-beta) and similar proteins

RNA

  1. XR_003002315.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.