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ABTB3 ankyrin repeat and BTB domain containing 3 [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

Gene ID: 112391076, updated on 15-Mar-2024

Summary

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Gene symbol
ABTB3
Gene description
ankyrin repeat and BTB domain containing 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
Also known as
BTBD11
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020175731.1 (815752..1119558, complement)

NW_020175731.1Genomic Context describing neighboring genes Neighboring gene PR/SET domain 4 Neighboring gene PWP1 homolog, endonuclein Neighboring gene 40S ribosomal protein S8 pseudogene Neighboring gene cryptochrome circadian regulator 1 Neighboring gene mitochondrial transcription termination factor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020175731 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and BTB/POZ domain-containing protein BTBD11
Names
BTB domain containing 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Genomic

  1. NW_020175731.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Range
    815752..1119558 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024732211.1 → XP_024587979.1  ankyrin repeat and BTB/POZ domain-containing protein BTBD11 isoform X2

    UniProtKB/TrEMBL
    A0A341ADI3
    Conserved Domains (4) summary
    cd00204
    Location:563 → 682
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:589 → 630
    ANK; ANK repeat [structural motif]
    pfam00651
    Location:779 → 886
    BTB; BTB/POZ domain
    cl25693
    Location:192 → 248
    H2A; Histone 2A; H2A is a subunit of the nucleosome. The nucleosome is an octamer containing two H2A, H2B, H3, and H4 subunits. The H2A subunit performs essential roles in maintaining structural integrity of the nucleosome, chromatin condensation, and binding ...

  2. XM_024732210.1 → XP_024587978.1  ankyrin repeat and BTB/POZ domain-containing protein BTBD11 isoform X1

    UniProtKB/TrEMBL
    A0A341AEF2
    Conserved Domains (4) summary
    cd00204
    Location:581 → 734
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:589 → 630
    ANK; ANK repeat [structural motif]
    pfam00651
    Location:898 → 1005
    BTB; BTB/POZ domain
    cl25693
    Location:192 → 248
    H2A; Histone 2A; H2A is a subunit of the nucleosome. The nucleosome is an octamer containing two H2A, H2B, H3, and H4 subunits. The H2A subunit performs essential roles in maintaining structural integrity of the nucleosome, chromatin condensation, and binding ...
Nucleotide Protein
Heading Accession and Version

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