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mrpl4 mitochondrial ribosomal protein L4 [ Oryzias melastigma (Indian medaka) ]

Gene ID: 112157498, updated on 10-Jul-2024

Summary

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Gene symbol
mrpl4
Gene description
mitochondrial ribosomal protein L4
See related
EnsemblRapid:ENSOMEG00005001896
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias melastigma
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG1
Exon count:
9
Annotation release Status Assembly LG Location
101 current ASM292280v2 (GCF_002922805.2) LG1 NC_050512.1 (31737513..31743157)
100 previous assembly Om_v0.7.RACA (GCF_002922805.1) Unplaced Scaffold NW_020096094.1 (907268..912881, complement)

Linkage Group LG1 - NC_050512.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112157369 Neighboring gene uncharacterized LOC112157499 Neighboring gene neuroblast differentiation-associated protein AHNAK Neighboring gene hydrolethalus syndrome protein 1 homolog Neighboring gene trichohyalin-like Neighboring gene hydrolethalus syndrome protein 1 homolog Neighboring gene collagen, type IX, alpha 1a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Tissue-specific transcriptome assemblies of the marine medaka Oryzias melastigma and comparative analysis with the freshwater medaka Oryzias latipes. Lai KP, et al. BMC Genomics, 2015 Feb 27. PMID 25765076, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
39S ribosomal protein L4, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias melastigma Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM292280v2 Primary Assembly

Genomic

  1. NC_050512.1 Reference ASM292280v2 Primary Assembly

    Range
    31737513..31743157
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024290259.2 → XP_024146027.1  39S ribosomal protein L4, mitochondrial

    UniProtKB/TrEMBL
    A0A834FS09
    Related
    ENSOMEP00005003312.1, ENSOMET00005003807.1
    Conserved Domains (1) summary
    pfam00573
    Location:90 → 280
    Ribosomal_L4; Ribosomal protein L4/L1 family
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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