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ptgfr prostaglandin F receptor (FP) [ Oryzias melastigma (Indian medaka) ]

Gene ID: 112137035, updated on 13-Jul-2024

Summary

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Gene symbol
ptgfr
Gene description
prostaglandin F receptor (FP)
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias melastigma
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
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Genomic context

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See ptgfr in Genome Data Viewer
Location:
chromosome: LG4
Exon count:
2
Annotation release Status Assembly LG Location
101 current ASM292280v2 (GCF_002922805.2) LG4 NC_050515.1 (4186412..4189225, complement)
100 previous assembly Om_v0.7.RACA (GCF_002922805.1) Unplaced Scaffold NW_020096107.1 (6802092..6806456)

Linkage Group LG4 - NC_050515.1Genomic Context describing neighboring genes Neighboring gene collagen beta(1-O)galactosyltransferase 2b Neighboring gene uncharacterized LOC112136994 Neighboring gene uncharacterized protein PF14_0093 Neighboring gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5b Neighboring gene uncharacterized LOC112137033

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables prostaglandin F receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thromboxane receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cytosolic calcium ion concentration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prostaglandin F2-alpha receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias melastigma Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM292280v2 Primary Assembly

Genomic

  1. NC_050515.1 Reference ASM292280v2 Primary Assembly

    Range
    4186412..4189225 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024259138.2 → XP_024114906.1  prostaglandin F2-alpha receptor

    UniProtKB/TrEMBL
    A0A3B3BFK2, A0A834CD81
    Conserved Domains (2) summary
    cd15145
    Location:23 → 47
    7tmA_FP; TM helix 1 [structural motif]
    cl28897
    Location:22 → 309
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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