U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SPAST spastin [ Terrapene triunguis (Three-toed box turtle) ]

Gene ID: 112115111, updated on 19-May-2024

Summary

Go to the top of the page Help
Gene symbol
SPAST
Gene description
spastin
See related
Ensembl:ENSTMTG00000007985
Gene type
protein coding
RefSeq status
MODEL
Organism
Terrapene triunguis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Terrapene
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SPAST in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
102 current T_m_triunguis-2.0 (GCF_002925995.2) Unplaced Scaffold NW_020664436.1 (12437722..12504088, complement)
100 previous assembly T_m_triunguis-1.0 (GCF_002925995.1) Unplaced Scaffold NW_019961919.1 (17271..86908, complement)

NW_020664436.1Genomic Context describing neighboring genes Neighboring gene glutaminyl-peptide cyclotransferase Neighboring gene solute carrier family 30 member 6 Neighboring gene dpy-30 histone methyltransferase complex regulatory subunit Neighboring gene mediator of cell motility 1 Neighboring gene steroid 5 alpha-reductase 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule severing ATPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
spastin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Terrapene carolina triunguis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T_m_triunguis-2.0

Genomic

  1. NW_020664436.1 Reference T_m_triunguis-2.0

    Range
    12437722..12504088 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024212099.3 → XP_024067867.2  spastin isoform X4

    UniProtKB/TrEMBL
    A0A674IQA8
    Conserved Domains (2) summary
    COG0464
    Location:296 → 563
    SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
    cd02679
    Location:113 → 191
    MIT_spastin; MIT: domain contained within Microtubule Interacting and Trafficking molecules. This MIT domain sub-family is found in the AAA protein spastin, a probable ATPase involved in the assembly or function of nuclear protein complexes; spastins might also be ...

  2. XM_024212097.3 → XP_024067865.2  spastin isoform X2

    UniProtKB/TrEMBL
    A0A674IS81
    Related
    ENSTMTP00000011043.1, ENSTMTT00000011407.1
    Conserved Domains (2) summary
    COG0464
    Location:328 → 595
    SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
    cd02679
    Location:113 → 191
    MIT_spastin; MIT: domain contained within Microtubule Interacting and Trafficking molecules. This MIT domain sub-family is found in the AAA protein spastin, a probable ATPase involved in the assembly or function of nuclear protein complexes; spastins might also be ...

  3. XM_024212098.2 → XP_024067866.2  spastin isoform X3

    UniProtKB/TrEMBL
    A0A674IQA8, A0A674ITQ2
    Related
    ENSTMTP00000011077.1, ENSTMTT00000011445.1
    Conserved Domains (2) summary
    COG0464
    Location:297 → 564
    SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
    cd02679
    Location:113 → 192
    MIT_spastin; MIT: domain contained within Microtubule Interacting and Trafficking molecules. This MIT domain sub-family is found in the AAA protein spastin, a probable ATPase involved in the assembly or function of nuclear protein complexes; spastins might also be ...

  4. XM_024212096.2 → XP_024067864.2  spastin isoform X1

    UniProtKB/TrEMBL
    A0A674IS56, A0A674IS81
    Related
    ENSTMTP00000011013.1, ENSTMTT00000011377.1
    Conserved Domains (2) summary
    COG0464
    Location:329 → 596
    SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
    cd02679
    Location:113 → 192
    MIT_spastin; MIT: domain contained within Microtubule Interacting and Trafficking molecules. This MIT domain sub-family is found in the AAA protein spastin, a probable ATPase involved in the assembly or function of nuclear protein complexes; spastins might also be ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.