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agmat agmatinase (putative) [ Salvelinus alpinus (Arctic char) ]

Gene ID: 111976417, updated on 18-Mar-2024

Summary

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Gene symbol
agmat
Gene description
agmatinase (putative)
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus alpinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG17
Exon count:
7
Annotation release Status Assembly LG Location
101 current ASM291031v2 (GCF_002910315.2) LG17 NC_036857.1 (25281083..25288236, complement)

Linkage Group LG17 - NC_036857.1Genomic Context describing neighboring genes Neighboring gene caspase 9 Neighboring gene dnaJ homolog subfamily C member 16-like Neighboring gene PTEN induced kinase 1 Neighboring gene cytidine deaminase a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036857.1 Chromosome LG17 Reference ASM291031v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables agmatinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in putrescine biosynthetic process from arginine, using agmatinase IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
agmatinase, mitochondrial
Names
agmatinase
agmatine ureohydrolase (agmatinase)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus alpinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM291031v2 Primary Assembly

Genomic

  1. NC_036857.1 Reference ASM291031v2 Primary Assembly

    Range
    25281083..25288236 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024005245.1 → XP_023861013.1  agmatinase, mitochondrial

    Conserved Domains (1) summary
    cd11592
    Location:70 → 356
    Agmatinase_PAH; Agmatinase-like family includes proclavaminic acid amidinohydrolase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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