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henmt1 HEN methyltransferase 1 [ Salvelinus sp. IW2-2015 ]

Gene ID: 111976080, updated on 13-Aug-2024

Summary

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Gene symbol
henmt1
Gene description
HEN methyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus sp. IW2-2015
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG16
Exon count:
6
Annotation release Status Assembly LG Location
101 current ASM291031v2 (GCF_002910315.2) LG16 NC_036856.1 (33610872..33613535, complement)

Linkage Group LG16 - NC_036856.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 24 Neighboring gene protein FAM102B Neighboring gene receptor-type tyrosine-protein phosphatase beta-like Neighboring gene syntaxin binding protein 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036856.1 Chromosome LG16 Reference ASM291031v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in piRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in siRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
small RNA 2'-O-methyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus alpinus Annotation Release 101

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM291031v2 Primary Assembly

Genomic

  1. NC_036856.1 Reference ASM291031v2 Primary Assembly

    Range
    33610872..33613535 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024004815.1 → XP_023860583.1  small RNA 2'-O-methyltransferase

    Conserved Domains (1) summary
    cl25638
    Location:7 → 209
    Hen1_L; RNA repair, ligase-Pnkp-associating, region of Hen1
Nucleotide Protein
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Gene LinkOut

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