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TRNAU1AP tRNA selenocysteine 1 associated protein 1 [ Cyanistes caeruleus (blue tit) ]

Gene ID: 111939052, updated on 3-Aug-2024

Summary

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Gene symbol
TRNAU1AP
Gene description
tRNA selenocysteine 1 associated protein 1
See related
Ensembl:ENSCCEG00000015334
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyanistes caeruleus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Cyanistes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 23
Exon count:
9
Annotation release Status Assembly Chr Location
100 current cyaCae2 (GCF_002901205.1) 23 Unlocalized Scaffold NW_019776533.1 (3285537..3299216)

NW_019776533.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 200B Neighboring gene erythrocyte membrane protein band 4.1 Neighboring gene small nucleolar RNA SNORA16B/SNORA16A family Neighboring gene small nucleolar RNA SNORA44

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019776533 Chromosome 23 Unlocalized Scaffold Reference cyaCae2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in selenocysteine incorporation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA selenocysteine 1-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyanistes caeruleus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference cyaCae2

Genomic

  1. NW_019776533.1 Reference cyaCae2

    Range
    3285537..3299216
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023941067.1 → XP_023796835.1  tRNA selenocysteine 1-associated protein 1 isoform X2

    Conserved Domains (1) summary
    cl17169
    Location:1 → 74
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_023941066.1 → XP_023796834.1  tRNA selenocysteine 1-associated protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0V058
    Conserved Domains (2) summary
    cd12612
    Location:82 → 163
    RRM2_SECp43; RNA recognition motif 2 in tRNA selenocysteine-associated protein 1 (SECp43)
    cl17169
    Location:1 → 74
    RRM_SF; RNA recognition motif (RRM) superfamily

  3. XM_023941064.1 → XP_023796832.1  tRNA selenocysteine 1-associated protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0V058
    Related
    ENSCCEP00000016364.1, ENSCCET00000025324.1
    Conserved Domains (2) summary
    cd12612
    Location:82 → 163
    RRM2_SECp43; RNA recognition motif 2 in tRNA selenocysteine-associated protein 1 (SECp43)
    cl17169
    Location:1 → 74
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
Heading Accession and Version

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