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RALGPS1 Ral GEF with PH domain and SH3 binding motif 1 [ Cyanistes caeruleus (blue tit) ]

Gene ID: 111937136, updated on 3-Aug-2024

Summary

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Gene symbol
RALGPS1
Gene description
Ral GEF with PH domain and SH3 binding motif 1
See related
Ensembl:ENSCCEG00000010586
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyanistes caeruleus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Cyanistes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
25
Annotation release Status Assembly Chr Location
100 current cyaCae2 (GCF_002901205.1) 17 Unlocalized Scaffold NW_019776507.1 (10752514..10830649)

NW_019776507.1Genomic Context describing neighboring genes Neighboring gene LIM homeobox transcription factor 1 beta Neighboring gene zinc finger and BTB domain containing 34 Neighboring gene angiopoietin like 2 Neighboring gene uncharacterized LOC111937139 Neighboring gene F-box and WD repeat domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019776507 Chromosome 17 Unlocalized Scaffold Reference cyaCae2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Ras protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-specific guanine nucleotide-releasing factor RalGPS1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyanistes caeruleus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference cyaCae2

Genomic

  1. NW_019776507.1 Reference cyaCae2

    Range
    10752514..10830649
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023938414.1 → XP_023794182.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0UQ39, A0A8C0UR95
    Related
    ENSCCEP00000010708.1, ENSCCET00000016811.1
    Conserved Domains (2) summary
    smart00147
    Location:46 → 290
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:458 → 573
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain

  2. XM_023938415.1 → XP_023794183.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0UQ39, A0A8C0UR95
    Related
    ENSCCEP00000010709.1, ENSCCET00000016812.1
    Conserved Domains (2) summary
    smart00147
    Location:46 → 290
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:458 → 573
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain

  3. XM_023938416.1 → XP_023794184.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X2

    Conserved Domains (1) summary
    smart00147
    Location:46 → 290
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases

RNA

  1. XR_002868446.1 RNA Sequence

  2. XR_002868447.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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