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SPOPL speckle type BTB/POZ protein like [ Cyanistes caeruleus (blue tit) ]

Gene ID: 111932327, updated on 3-Aug-2024

Summary

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Gene symbol
SPOPL
Gene description
speckle type BTB/POZ protein like
See related
Ensembl:ENSCCEG00000010645
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyanistes caeruleus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Cyanistes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
11
Annotation release Status Assembly Chr Location
100 current cyaCae2 (GCF_002901205.1) 7 Unlocalized Scaffold NW_019776435.1 (33284567..33304610)

NW_019776435.1Genomic Context describing neighboring genes Neighboring gene histamine N-methyltransferase-like Neighboring gene uncharacterized LOC111932326 Neighboring gene neurexophilin 2 Neighboring gene uncharacterized LOC111932330

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019776435 Chromosome 7 Unlocalized Scaffold Reference cyaCae2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
speckle-type POZ protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyanistes caeruleus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference cyaCae2

Genomic

  1. NW_019776435.1 Reference cyaCae2

    Range
    33284567..33304610
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023931390.1 → XP_023787158.1  speckle-type POZ protein-like

    UniProtKB/TrEMBL
    A0A8C0ULP0
    Related
    ENSCCEP00000010815.1, ENSCCET00000016931.1
    Conserved Domains (3) summary
    cd18343
    Location:179 → 301
    BTB_POZ_SPOPL; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in speckle-type POZ protein-like (SPOPL)
    cd18519
    Location:297 → 392
    BACK_SPOPL; BACK (BTB and C-terminal Kelch) domain found in speckle-type POZ protein-like (SPOPL)
    cl02446
    Location:28 → 166
    MATH; MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-sandwich structure found in meprins, TRAFs and other proteins. Meprins comprise a class of extracellular metalloproteases which are anchored to the membrane ...

RNA

  1. XR_002866084.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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