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USP6NL USP6 N-terminal like [ Cyanistes caeruleus (blue tit) ]

Gene ID: 111923127, updated on 3-Aug-2024

Summary

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Gene symbol
USP6NL
Gene description
USP6 N-terminal like
See related
Ensembl:ENSCCEG00000001828
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyanistes caeruleus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Cyanistes
Orthologs
human mouse all
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Genomic context

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See USP6NL in Genome Data Viewer
Location:
chromosome: 1
Exon count:
22
Annotation release Status Assembly Chr Location
100 current cyaCae2 (GCF_002901205.1) 1 Unlocalized Scaffold NW_019776256.1 (2600356..2709820)

NW_019776256.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111923126 Neighboring gene enoyl-CoA hydratase domain containing 3 Neighboring gene uncharacterized LOC111923129 Neighboring gene CUGBP Elav-like family member 2 Neighboring gene uncharacterized LOC111923133

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019776256 Chromosome 1 Unlocalized Scaffold Reference cyaCae2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
USP6 N-terminal-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyanistes caeruleus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference cyaCae2

Genomic

  1. NW_019776256.1 Reference cyaCae2

    Range
    2600356..2709820
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023918755.1 → XP_023774523.1  USP6 N-terminal-like protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0U335
    Related
    ENSCCEP00000001594.1, ENSCCET00000002696.1
    Conserved Domains (2) summary
    smart00164
    Location:99 → 314
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    cl26464
    Location:515 → 818
    Atrophin-1; Atrophin-1 family

  2. XM_023918751.1 → XP_023774519.1  USP6 N-terminal-like protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0U335
    Conserved Domains (2) summary
    smart00164
    Location:99 → 314
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    cl26464
    Location:515 → 818
    Atrophin-1; Atrophin-1 family

  3. XM_023918753.1 → XP_023774521.1  USP6 N-terminal-like protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0U335
    Conserved Domains (2) summary
    smart00164
    Location:99 → 314
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    cl26464
    Location:515 → 818
    Atrophin-1; Atrophin-1 family

  4. XM_023918748.1 → XP_023774516.1  USP6 N-terminal-like protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0U335
    Conserved Domains (2) summary
    smart00164
    Location:99 → 314
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    cl26464
    Location:515 → 818
    Atrophin-1; Atrophin-1 family

  5. XM_023918750.1 → XP_023774518.1  USP6 N-terminal-like protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0U335
    Conserved Domains (2) summary
    smart00164
    Location:99 → 314
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    cl26464
    Location:515 → 818
    Atrophin-1; Atrophin-1 family

  6. XM_023918754.1 → XP_023774522.1  USP6 N-terminal-like protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0U335
    Conserved Domains (2) summary
    smart00164
    Location:99 → 314
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    cl26464
    Location:515 → 818
    Atrophin-1; Atrophin-1 family

  7. XM_023918749.1 → XP_023774517.1  USP6 N-terminal-like protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0U335
    Conserved Domains (2) summary
    smart00164
    Location:99 → 314
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    cl26464
    Location:515 → 818
    Atrophin-1; Atrophin-1 family

  8. XM_023918752.1 → XP_023774520.1  USP6 N-terminal-like protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0U335
    Conserved Domains (2) summary
    smart00164
    Location:99 → 314
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    cl26464
    Location:515 → 818
    Atrophin-1; Atrophin-1 family

  9. XM_023918746.1 → XP_023774514.1  USP6 N-terminal-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0U0N6
    Related
    ENSCCEP00000001597.1, ENSCCET00000002701.1
    Conserved Domains (2) summary
    smart00164
    Location:122 → 337
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    cl26464
    Location:538 → 841
    Atrophin-1; Atrophin-1 family

  10. XM_023918747.1 → XP_023774515.1  USP6 N-terminal-like protein isoform X2

    UniProtKB/TrEMBL
    A0A8C0U0P5
    Related
    ENSCCEP00000001609.1, ENSCCET00000002730.1
    Conserved Domains (2) summary
    smart00164
    Location:117 → 332
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    cl26464
    Location:533 → 836
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

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