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fynb FYN proto-oncogene, Src family tyrosine kinase b [ Amphiprion ocellaris (clown anemonefish) ]

Gene ID: 111563357, updated on 18-Jun-2024

Summary

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Gene symbol
fynb
Gene description
FYN proto-oncogene, Src family tyrosine kinase b
See related
Ensembl:ENSAOCG00000017025
Gene type
protein coding
RefSeq status
MODEL
Organism
Amphiprion ocellaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Amphiprion
Also known as
fyn
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 12
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_03 current ASM2253959v1 (GCF_022539595.1) 12 NC_072777.1 (23087976..23192962, complement)
101 previous assembly AmpOce1.0 (GCF_002776465.1) Unplaced Scaffold NW_019371737.1 (112455..200143)

Chromosome 12 - NC_072777.1Genomic Context describing neighboring genes Neighboring gene TRAF3 interacting protein 2a Neighboring gene probable G-protein coupled receptor 139 Neighboring gene uncharacterized LOC118471523 Neighboring gene uncharacterized LOC129350137

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables non-membrane spanning protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in T cell receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extrinsic component of cytoplasmic side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine-protein kinase fynb
Names
FYN proto-oncogene, Src family tyrosine kinase
tyrosine-protein kinase Fyn

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539595.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2253959v1 Primary Assembly

Genomic

  1. NC_072777.1 Reference ASM2253959v1 Primary Assembly

    Range
    23087976..23192962 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055015993.1 → XP_054871968.1  tyrosine-protein kinase fynb isoform X2

    UniProtKB/TrEMBL
    A0A3Q1BEP0
    Related
    ENSAOCP00000058447.1, ENSAOCT00000079629.1

  2. XM_055015991.1 → XP_054871966.1  tyrosine-protein kinase fynb isoform X1

    UniProtKB/TrEMBL
    A0A3Q1BEP0
    Related
    ENSAOCP00000078753.1, ENSAOCT00000043135.1

  3. XM_035944726.2 → XP_035800619.1  tyrosine-protein kinase fynb isoform X1

    UniProtKB/TrEMBL
    A0A3Q1BEP0
    Conserved Domains (3) summary
    cd10418
    Location:145 → 245
    SH2_Src_Fyn_isoform_a_like; Src homology 2 (SH2) domain found in Fyn isoform a like proteins
    cd12006
    Location:85 → 140
    SH3_Fyn_Yrk; Src homology 3 domain of Fyn and Yrk Protein Tyrosine Kinases
    cd14203
    Location:275 → 522
    PTKc_Src_Fyn_like; Catalytic domain of a subset of Src kinase-like Protein Tyrosine Kinases
Nucleotide Protein
Heading Accession and Version

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