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RAE1 ribonucleic acid export 1 [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

Gene ID: 111555661, updated on 15-Mar-2024

Summary

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Gene symbol
RAE1
Gene description
ribonucleic acid export 1
See related
Ensembl:ENSPTEG00000009095
Gene type
protein coding
RefSeq status
MODEL
Organism
Piliocolobus tephrosceles
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
Orthologs
human mouse all
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Genomic context

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See RAE1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
12
Annotation release Status Assembly Chr Location
102 current ASM277652v3 (GCF_002776525.3) 20 NC_045453.1 (30081389..30108609)
100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019317903.1 (4141294..4168524, complement)

Chromosome 20 - NC_045453.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111555657 Neighboring gene SPO11 initiator of meiotic double strand breaks Neighboring gene MT-RNR2 like 3 Neighboring gene uncharacterized LOC116418552 Neighboring gene RNA binding motif protein 38 Neighboring gene CCCTC-binding factor like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mRNA export factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM277652v3

Genomic

  1. NC_045453.1 Reference ASM277652v3

    Range
    30081389..30108609
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023231921.1 → XP_023087689.1  mRNA export factor

    UniProtKB/TrEMBL
    A0A8C9GQR9
    Related
    ENSPTEP00000008010.1, ENSPTET00000012208.1
    Conserved Domains (2) summary
    sd00039
    Location:42 → 84
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:40 → 335
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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