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PHF10 PHD finger protein 10 [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

Gene ID: 111530899, updated on 15-Mar-2024

Summary

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Gene symbol
PHF10
Gene description
PHD finger protein 10
See related
Ensembl:ENSPTEG00000009132
Gene type
protein coding
RefSeq status
MODEL
Organism
Piliocolobus tephrosceles
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
Orthologs
human mouse all
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Genomic context

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See PHF10 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
13
Annotation release Status Assembly Chr Location
102 current ASM277652v3 (GCF_002776525.3) 5 NC_045438.1 (20427870..20447718, complement)
100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019322881.1 (874699..894494, complement)

Chromosome 5 - NC_045438.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111530916 Neighboring gene thrombospondin 2 Neighboring gene WD repeat domain 27 Neighboring gene chromosome 5 C6orf120 homolog Neighboring gene uncharacterized LOC111530901 Neighboring gene dynein light chain Tctex-type 2 Neighboring gene ER membrane associated RNA degradation

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of npBAF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PHD finger protein 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM277652v3

Genomic

  1. NC_045438.1 Reference ASM277652v3

    Range
    20427870..20447718 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023198136.2 → XP_023053904.2  PHD finger protein 10 isoform X4

    UniProtKB/TrEMBL
    A0A8C9GS16
    Conserved Domains (2) summary
    cd15528
    Location:330 → 384
    PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
    cd15529
    Location:386 → 429
    PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins

  2. XM_023198135.2 → XP_023053903.2  PHD finger protein 10 isoform X3

    UniProtKB/TrEMBL
    A0A8C9GS16
    Related
    ENSPTEP00000008039.1, ENSPTET00000012271.1
    Conserved Domains (2) summary
    cd15528
    Location:332 → 386
    PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
    cd15529
    Location:388 → 431
    PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins

  3. XM_023198134.3 → XP_023053902.2  PHD finger protein 10 isoform X2

    UniProtKB/TrEMBL
    A0A8C9GS16
    Conserved Domains (2) summary
    cd15528
    Location:391 → 445
    PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
    cd15529
    Location:447 → 490
    PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins

  4. XM_023198133.3 → XP_023053901.2  PHD finger protein 10 isoform X1

    UniProtKB/TrEMBL
    A0A8C9GS16, A0A8C9GVS7
    Related
    ENSPTEP00000008033.1
    Conserved Domains (2) summary
    cd15528
    Location:393 → 447
    PHD1_PHF10; PHD finger 1 found in PHD finger protein 10 (PHF10) and similar proteins
    cd15529
    Location:449 → 492
    PHD2_PHF10; PHD finger 2 found in PHD finger protein 10 (PHF10) and similar proteins
Nucleotide Protein
Heading Accession and Version

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