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HENMT1 HEN methyltransferase 1 [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

Gene ID: 111529343, updated on 15-Mar-2024

Summary

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Gene symbol
HENMT1
Gene description
HEN methyltransferase 1
See related
Ensembl:ENSPTEG00000008988
Gene type
protein coding
RefSeq status
MODEL
Organism
Piliocolobus tephrosceles
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
102 current ASM277652v3 (GCF_002776525.3) 1 NC_045434.1 (112444788..112461034)
100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019320848.1 (161673..177706, complement)

Chromosome 1 - NC_045434.1Genomic Context describing neighboring genes Neighboring gene fibronectin type III domain containing 7 Neighboring gene uncharacterized LOC111529333 Neighboring gene pre-mRNA processing factor 38B Neighboring gene EEIG family member 2 Neighboring gene 60S ribosomal protein L7-like 1 Neighboring gene myosin phosphatase Rho-interacting protein pseudogene Neighboring gene myosin phosphatase Rho-interacting protein pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in piRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in siRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
small RNA 2'-O-methyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM277652v3

Genomic

  1. NC_045434.1 Reference ASM277652v3

    Range
    112444788..112461034
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023196261.2 → XP_023052029.1  small RNA 2'-O-methyltransferase isoform X3

    UniProtKB/TrEMBL
    A0A8C9LJT0
    Conserved Domains (1) summary
    cl25638
    Location:8 → 188
    Hen1_L; RNA repair, ligase-Pnkp-associating, region of Hen1

  2. XM_023196256.2 → XP_023052024.1  small RNA 2'-O-methyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A8C9LJT0
    Conserved Domains (1) summary
    cl25638
    Location:17 → 231
    Hen1_L; RNA repair, ligase-Pnkp-associating, region of Hen1

  3. XM_023196254.2 → XP_023052022.1  small RNA 2'-O-methyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A8C9LJT0
    Conserved Domains (1) summary
    cl25638
    Location:17 → 231
    Hen1_L; RNA repair, ligase-Pnkp-associating, region of Hen1

  4. XM_023196257.2 → XP_023052025.1  small RNA 2'-O-methyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A8C9LJT0
    Conserved Domains (1) summary
    cl25638
    Location:17 → 231
    Hen1_L; RNA repair, ligase-Pnkp-associating, region of Hen1

  5. XM_023196259.2 → XP_023052027.1  small RNA 2'-O-methyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A8C9LJT0
    Conserved Domains (1) summary
    cl25638
    Location:17 → 231
    Hen1_L; RNA repair, ligase-Pnkp-associating, region of Hen1

  6. XM_023196258.2 → XP_023052026.1  small RNA 2'-O-methyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A8C9LJT0
    Conserved Domains (1) summary
    cl25638
    Location:17 → 231
    Hen1_L; RNA repair, ligase-Pnkp-associating, region of Hen1

  7. XM_023196260.2 → XP_023052028.1  small RNA 2'-O-methyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A8C9GQI7, A0A8C9LJT0
    Related
    ENSPTEP00000007907.1
    Conserved Domains (1) summary
    cl25638
    Location:17 → 231
    Hen1_L; RNA repair, ligase-Pnkp-associating, region of Hen1
Nucleotide Protein
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