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CIRBP cold inducible RNA binding protein [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

Gene ID: 111526790, updated on 15-Mar-2024

Summary

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Gene symbol
CIRBP
Gene description
cold inducible RNA binding protein
See related
Ensembl:ENSPTEG00000033188
Gene type
protein coding
RefSeq status
MODEL
Organism
Piliocolobus tephrosceles
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 21
Exon count:
8
Annotation release Status Assembly Chr Location
102 current ASM277652v3 (GCF_002776525.3) 21 NC_045454.1 (51617097..51623078, complement)
100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019318543.1 (221813..227795, complement)

Chromosome 21 - NC_045454.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S15 Neighboring gene ephrin A2 Neighboring gene family with sequence similarity 174 member C Neighboring gene midnolin Neighboring gene ATP synthase F1 subunit delta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cold-inducible RNA-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM277652v3

Genomic

  1. NC_045454.1 Reference ASM277652v3

    Range
    51617097..51623078 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031934770.1 → XP_031790630.1  cold-inducible RNA-binding protein isoform X3

    UniProtKB/TrEMBL
    A0A8C9IFJ2
    Conserved Domains (1) summary
    cd12449
    Location:6 → 85
    RRM_CIRBP_RBM3; RNA recognition motif (RRM) found in cold inducible RNA binding protein (CIRBP), RNA binding motif protein 3 (RBM3) and similar proteins

  2. XM_031934768.1 → XP_031790628.1  cold-inducible RNA-binding protein isoform X1

    Conserved Domains (1) summary
    cd12449
    Location:6 → 85
    RRM_CIRBP_RBM3; RNA recognition motif (RRM) found in cold inducible RNA binding protein (CIRBP), RNA binding motif protein 3 (RBM3) and similar proteins

  3. XM_031934769.1 → XP_031790629.1  cold-inducible RNA-binding protein isoform X2

    UniProtKB/TrEMBL
    A0A8C9ILJ0
    Conserved Domains (1) summary
    cd12449
    Location:6 → 85
    RRM_CIRBP_RBM3; RNA recognition motif (RRM) found in cold inducible RNA binding protein (CIRBP), RNA binding motif protein 3 (RBM3) and similar proteins
Nucleotide Protein
Heading Accession and Version

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