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gas2 growth arrest specific 2 [ Seriola dumerili (greater amberjack) ]

Gene ID: 111229742, updated on 15-Mar-2024

Summary

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Gene symbol
gas2
Gene description
growth arrest specific 2
See related
Ensembl:ENSSDUG00000020211
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174497.1 (538693..556796)

NW_019174497.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 17 member 6 Neighboring gene FA complementation group F Neighboring gene small VCP interacting protein Neighboring gene anoctamin 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174497 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytoskeletal anchor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin crosslink formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
growth arrest-specific protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174497.1 Reference Sdu_1.0 Primary Assembly

    Range
    538693..556796
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022756212.1 → XP_022611933.1  growth arrest-specific protein 2

    UniProtKB/TrEMBL
    A0A3B4VAX1, A0A3B4VDI1
    Related
    ENSSDUP00000027970.1, ENSSDUT00000028461.1
    Conserved Domains (2) summary
    cd00014
    Location:35 → 160
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    pfam02187
    Location:229 → 298
    GAS2; Growth-Arrest-Specific Protein 2 Domain
Nucleotide Protein
Heading Accession and Version

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