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gal3st1a galactose-3-O-sulfotransferase 1a [ Seriola dumerili (greater amberjack) ]

Gene ID: 111229562, updated on 15-Mar-2024

Summary

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Gene symbol
gal3st1a
Gene description
galactose-3-O-sulfotransferase 1a
See related
Ensembl:ENSSDUG00000013317
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Also known as
gal3st1
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174272.1 (863030..869530)

NW_019174272.1Genomic Context describing neighboring genes Neighboring gene purinergic receptor P2X, ligand-gated ion channel, 2 Neighboring gene pescadillo Neighboring gene leucine zipper like post translational regulator 1 Neighboring gene claudin 26

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174272 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramide sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactosylceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in myelination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylceramide sulfotransferase
Names
galactose-3-O-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174272.1 Reference Sdu_1.0 Primary Assembly

    Range
    863030..869530
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022755926.1 → XP_022611647.1  galactosylceramide sulfotransferase

    UniProtKB/TrEMBL
    A0A3B4UIN4
    Related
    ENSSDUP00000018227.1, ENSSDUT00000018558.1
    Conserved Domains (1) summary
    cl22970
    Location:1 → 410
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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