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rdm1 RAD52 motif containing 1 [ Seriola dumerili (greater amberjack) ]

Gene ID: 111226861, updated on 15-Mar-2024

Summary

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Gene symbol
rdm1
Gene description
RAD52 motif containing 1
See related
Ensembl:ENSSDUG00000015281
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174421.1 (1906..6125, complement)

NW_019174421.1Genomic Context describing neighboring genes Neighboring gene DELTA-actitoxin-Aeq1b-like Neighboring gene ABI family, member 3a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174421 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RAD52 motif-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174421.1 Reference Sdu_1.0 Primary Assembly

    Range
    1906..6125 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022752161.1 → XP_022607882.1  RAD52 motif-containing protein 1 isoform X1

    Conserved Domains (1) summary
    cl17169
    Location:16 → 96
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_022752159.1 → XP_022607880.1  RAD52 motif-containing protein 1 isoform X1

    Conserved Domains (1) summary
    cl17169
    Location:16 → 96
    RRM_SF; RNA recognition motif (RRM) superfamily

  3. XM_022752160.1 → XP_022607881.1  RAD52 motif-containing protein 1 isoform X1

    Conserved Domains (1) summary
    cl17169
    Location:16 → 96
    RRM_SF; RNA recognition motif (RRM) superfamily

  4. XM_022752162.1 → XP_022607883.1  RAD52 motif-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A3B4URC7
    Related
    ENSSDUP00000020999.1, ENSSDUT00000021380.1
    Conserved Domains (1) summary
    cl17169
    Location:16 → 96
    RRM_SF; RNA recognition motif (RRM) superfamily

  5. XM_022752163.1 → XP_022607884.1  RAD52 motif-containing protein 1 isoform X3

    Conserved Domains (1) summary
    cl17169
    Location:2 → 62
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
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