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CLDN6 claudin 6 [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111185219, updated on 15-Mar-2024

Summary

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Gene symbol
CLDN6
Gene description
claudin 6
See related
Ensembl:ENSDLEG00000014244
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098040.1 (12835969..12840297, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160905.1 (12837139..12840756, complement)

NW_022098040.1Genomic Context describing neighboring genes Neighboring gene collagen alpha-5(IV) chain-like Neighboring gene claudin 9 Neighboring gene TNF receptor superfamily member 12A Neighboring gene host cell factor C1 regulator 1 Neighboring gene THO complex subunit 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bicellular tight junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
claudin-6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098040.1 Reference ASM228892v3 Primary Assembly

    Range
    12835969..12840297 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022594643.2 → XP_022450351.1  claudin-6

    UniProtKB/TrEMBL
    A0A2Y9PYY0
    Related
    ENSDLEP00000019558.1, ENSDLET00000021556.1
    Conserved Domains (1) summary
    cl21598
    Location:5 → 170
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  2. XM_022594642.2 → XP_022450350.1  claudin-6

    UniProtKB/TrEMBL
    A0A2Y9PYY0
    Conserved Domains (1) summary
    cl21598
    Location:5 → 170
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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