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NSMCE1 NSE1 homolog, SMC5-SMC6 complex component [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111182216, updated on 15-Mar-2024

Summary

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Gene symbol
NSMCE1
Gene description
NSE1 homolog, SMC5-SMC6 complex component
See related
Ensembl:ENSDLEG00000011431
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098040.1 (31205555..31238515, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160893.1 (13321280..13354266)

NW_022098040.1Genomic Context describing neighboring genes Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene lysine demethylase 8 Neighboring gene interleukin 4 receptor Neighboring gene uncharacterized LOC115803766 Neighboring gene interleukin 21 receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in postreplication repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Smc5-Smc6 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
non-structural maintenance of chromosomes element 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098040.1 Reference ASM228892v3 Primary Assembly

    Range
    31205555..31238515 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022588479.2 → XP_022444187.2  non-structural maintenance of chromosomes element 1 homolog isoform X2

    UniProtKB/TrEMBL
    A0A2Y9PLL6, A0A2Y9PN56
    Related
    ENSDLEP00000015517.1, ENSDLET00000017140.1
    Conserved Domains (2) summary
    cd16493
    Location:191 → 234
    RING-CH-C4HC3_NSE1; RING-CH finger, H2 subclass (C4HC3-type), found in non-structural maintenance of chromosomes element 1 homolog (NSE1) and similar proteins
    pfam07574
    Location:16 → 175
    SMC_Nse1; Nse1 non-SMC component of SMC5-6 complex

  2. XM_022588480.2 → XP_022444188.1  non-structural maintenance of chromosomes element 1 homolog isoform X2

    UniProtKB/TrEMBL
    A0A2Y9PLL6, A0A2Y9PN56
    Conserved Domains (2) summary
    cd16493
    Location:191 → 234
    RING-CH-C4HC3_NSE1; RING-CH finger, H2 subclass (C4HC3-type), found in non-structural maintenance of chromosomes element 1 homolog (NSE1) and similar proteins
    pfam07574
    Location:16 → 175
    SMC_Nse1; Nse1 non-SMC component of SMC5-6 complex

  3. XM_022588477.2 → XP_022444185.1  non-structural maintenance of chromosomes element 1 homolog isoform X1

    UniProtKB/TrEMBL
    A0A2Y9PE63
    Related
    ENSDLEP00000015525.1, ENSDLET00000017148.1
    Conserved Domains (2) summary
    pfam07574
    Location:95 → 235
    SMC_Nse1; Nse1 non-SMC component of SMC5-6 complex
    cd16493
    Location:251 → 294
    RING-CH-C4HC3_NSE1; RING-CH finger, H2 subclass (C4HC3-type), found in non-structural maintenance of chromosomes element 1 homolog (NSE1) and similar proteins
Nucleotide Protein
Heading Accession and Version

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