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CROT carnitine O-octanoyltransferase [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111182205, updated on 15-Mar-2024

Summary

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Gene symbol
CROT
Gene description
carnitine O-octanoyltransferase
See related
Ensembl:ENSDLEG00000021200
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See CROT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098064.1 (76455971..76549982, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160856.1 (76458415..76555999, complement)

NW_022098064.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S2 pseudogene Neighboring gene ATP binding cassette subfamily B member 1 Neighboring gene ATP binding cassette subfamily B member 4 Neighboring gene transmembrane protein 243 Neighboring gene cyclin D binding myb like transcription factor 1 Neighboring gene uncharacterized LOC111182275

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carnitine O-octanoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisomal carnitine O-octanoyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098064.1 Reference ASM228892v3 Primary Assembly

    Range
    76455971..76549982 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022588478.2 → XP_022444186.1  peroxisomal carnitine O-octanoyltransferase isoform X3

    UniProtKB/TrEMBL
    A0A2Y9PFX2
    Conserved Domains (1) summary
    pfam00755
    Location:20 → 575
    Carn_acyltransf; Choline/Carnitine o-acyltransferase

  2. XM_022588457.2 → XP_022444165.1  peroxisomal carnitine O-octanoyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A2Y9PE40
    Conserved Domains (1) summary
    pfam00755
    Location:20 → 582
    Carn_acyltransf; Choline/Carnitine o-acyltransferase

  3. XM_022588491.2 → XP_022444199.1  peroxisomal carnitine O-octanoyltransferase isoform X4

    UniProtKB/TrEMBL
    A0A2Y9PB78
    Conserved Domains (1) summary
    pfam00755
    Location:18 → 537
    Carn_acyltransf; Choline/Carnitine o-acyltransferase

  4. XM_022588448.1 → XP_022444156.1  peroxisomal carnitine O-octanoyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A2Y9PLH5
    Conserved Domains (1) summary
    pfam00755
    Location:20 → 600
    Carn_acyltransf; Choline/Carnitine o-acyltransferase

  5. XM_022588439.1 → XP_022444147.1  peroxisomal carnitine O-octanoyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A2Y9PLH5
    Related
    ENSDLEP00000029655.1, ENSDLET00000032570.1
    Conserved Domains (1) summary
    pfam00755
    Location:20 → 600
    Carn_acyltransf; Choline/Carnitine o-acyltransferase

  6. XM_022588508.1 → XP_022444216.1  peroxisomal carnitine O-octanoyltransferase isoform X5

    UniProtKB/TrEMBL
    A0A2Y9PG03
    Conserved Domains (1) summary
    pfam00755
    Location:20 → 220
    Carn_acyltransf; Choline/Carnitine o-acyltransferase

RNA

  1. XR_002646691.1 RNA Sequence

  2. XR_002646692.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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