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TBC1D9B TBC1 domain family member 9B [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111169260, updated on 15-Mar-2024

Summary

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Gene symbol
TBC1D9B
Gene description
TBC1 domain family member 9B
See related
Ensembl:ENSDLEG00000017012
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098085.1 (2502560..2547585, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019161003.1 (2484521..2529547, complement)

NW_022098085.1Genomic Context describing neighboring genes Neighboring gene alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B Neighboring gene sequestosome 1 Neighboring gene MRN complex interacting protein Neighboring gene ring finger protein 130 Neighboring gene rab-like protein 2A pseudogene Neighboring gene RasGEF domain family member 1C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TBC1 domain family member 9B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098085.1 Reference ASM228892v3 Primary Assembly

    Range
    2502560..2547585 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022563308.2 → XP_022419016.1  TBC1 domain family member 9B isoform X3

    UniProtKB/TrEMBL
    A0A2Y9MDD9
    Conserved Domains (4) summary
    smart00054
    Location:711 → 736
    EFh; EF-hand, calcium binding motif
    smart00164
    Location:421 → 540
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    cd13354
    Location:299 → 394
    PH-GRAM2_TCB1D9_TCB1D9B; TBC1 domain family members 9 and 9B (TBC1D9 and TBC1D9B) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain, repeat 2
    cd13351
    Location:153 → 251
    PH-GRAM1_TCB1D9_TCB1D9B; TBC1 domain family members 9 and 9B (TBC1D9 and TBC1D9B) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain, repeat 1

  2. XM_022563307.2 → XP_022419015.1  TBC1 domain family member 9B isoform X2

    UniProtKB/TrEMBL
    A0A2Y9MBB5
    Related
    ENSDLEP00000023524.1, ENSDLET00000025879.1
    Conserved Domains (4) summary
    smart00054
    Location:887 → 912
    EFh; EF-hand, calcium binding motif
    smart00164
    Location:506 → 716
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    cd13354
    Location:299 → 394
    PH-GRAM2_TCB1D9_TCB1D9B; TBC1 domain family members 9 and 9B (TBC1D9 and TBC1D9B) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain, repeat 2
    cd13351
    Location:153 → 251
    PH-GRAM1_TCB1D9_TCB1D9B; TBC1 domain family members 9 and 9B (TBC1D9 and TBC1D9B) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain, repeat 1

  3. XM_022563306.2 → XP_022419014.1  TBC1 domain family member 9B isoform X1

    UniProtKB/TrEMBL
    A0A2Y9MA00
    Related
    ENSDLEP00000023482.1, ENSDLET00000025836.1
    Conserved Domains (4) summary
    smart00054
    Location:887 → 912
    EFh; EF-hand, calcium binding motif
    smart00164
    Location:506 → 716
    TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
    cd13354
    Location:299 → 394
    PH-GRAM2_TCB1D9_TCB1D9B; TBC1 domain family members 9 and 9B (TBC1D9 and TBC1D9B) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain, repeat 2
    cd13351
    Location:153 → 251
    PH-GRAM1_TCB1D9_TCB1D9B; TBC1 domain family members 9 and 9B (TBC1D9 and TBC1D9B) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain, repeat 1
Nucleotide Protein
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