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TRAPPC12 trafficking protein particle complex subunit 12 [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111168003, updated on 15-Mar-2024

Summary

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Gene symbol
TRAPPC12
Gene description
trafficking protein particle complex subunit 12
See related
Ensembl:ENSDLEG00000010405
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098073.1 (2381877..2444576, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160976.1 (2360735..2423434, complement)

NW_022098073.1Genomic Context describing neighboring genes Neighboring gene ribonuclease H1 Neighboring gene acireductone dioxygenase 1 Neighboring gene EARP complex and GARP complex interacting protein 1 Neighboring gene uncharacterized LOC111168005

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of TRAPP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trafficking protein particle complex subunit 12
Names
trafficking protein particle complex 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098073.1 Reference ASM228892v3 Primary Assembly

    Range
    2381877..2444576 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022561487.1 → XP_022417195.1  trafficking protein particle complex subunit 12

    UniProtKB/TrEMBL
    A0A2Y9MDR1
    Related
    ENSDLEP00000014155.1, ENSDLET00000015623.1
    Conserved Domains (5) summary
    sd00006
    Location:604 → 628
    TPR; TPR repeat [structural motif]
    pfam07719
    Location:677 → 706
    TPR_2; Tetratricopeptide repeat
    pfam13424
    Location:637 → 704
    TPR_12; Tetratricopeptide repeat
    cl26250
    Location:606 → 663
    TPR_6; Tetratricopeptide repeat
    cl28033
    Location:1 → 396
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

  2. XM_022561488.2 → XP_022417196.1  trafficking protein particle complex subunit 12

    UniProtKB/TrEMBL
    A0A2Y9MDR1
    Conserved Domains (5) summary
    sd00006
    Location:604 → 628
    TPR; TPR repeat [structural motif]
    pfam07719
    Location:677 → 706
    TPR_2; Tetratricopeptide repeat
    pfam13424
    Location:637 → 704
    TPR_12; Tetratricopeptide repeat
    cl26250
    Location:606 → 663
    TPR_6; Tetratricopeptide repeat
    cl28033
    Location:1 → 396
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

  3. XM_022561489.2 → XP_022417197.1  trafficking protein particle complex subunit 12

    UniProtKB/TrEMBL
    A0A2Y9MDR1
    Conserved Domains (5) summary
    sd00006
    Location:604 → 628
    TPR; TPR repeat [structural motif]
    pfam07719
    Location:677 → 706
    TPR_2; Tetratricopeptide repeat
    pfam13424
    Location:637 → 704
    TPR_12; Tetratricopeptide repeat
    cl26250
    Location:606 → 663
    TPR_6; Tetratricopeptide repeat
    cl28033
    Location:1 → 396
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
Nucleotide Protein
Heading Accession and Version

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