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YDJC YdjC chitooligosaccharide deacetylase homolog [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111163035, updated on 15-Mar-2024

Summary

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Gene symbol
YDJC
Gene description
YdjC chitooligosaccharide deacetylase homolog
See related
Ensembl:ENSDLEG00000015648
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098052.1 (10344830..10346704, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160923.1 (10346716..10348732, complement)

NW_022098052.1Genomic Context describing neighboring genes Neighboring gene RIMS-binding protein 3C-like Neighboring gene ubiquitin conjugating enzyme E2 L3 Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene coiled-coil domain containing 116 Neighboring gene stromal cell derived factor 2 like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate deacetylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098052.1 Reference ASM228892v3 Primary Assembly

    Range
    10344830..10346704 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022551436.2 → XP_022407144.1  carbohydrate deacetylase isoform X1

    UniProtKB/TrEMBL
    A0A2Y9LBT7
    Related
    ENSDLEP00000021542.1, ENSDLET00000023720.1
    Conserved Domains (1) summary
    cd10806
    Location:5 → 284
    YdjC_like_2; uncharacterized YdjC-like family proteins from eukaryotes

  2. XM_022551437.1 → XP_022407145.1  carbohydrate deacetylase isoform X2

    UniProtKB/TrEMBL
    A0A2Y9LBU9
    Conserved Domains (1) summary
    cl25404
    Location:5 → 200
    GH38-57_N_LamB_YdjC_SF; Catalytic domain of glycoside hydrolase (GH) families 38 and 57, lactam utilization protein LamB/YcsF family proteins, YdjC-family proteins, and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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