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LOC110965031 synapse differentiation-inducing gene protein 1 [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110965031, updated on 15-Mar-2024

Summary

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Gene symbol
LOC110965031
Gene description
synapse differentiation-inducing gene protein 1
See related
Ensembl:ENSAPOG00000016849
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Also known as
syndig1
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 15
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 15 NC_067127.1 (38591528..38612195, complement)

Chromosome 15 - NC_067127.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127537500 Neighboring gene uncharacterized LOC127537507 Neighboring gene cystatin-F Neighboring gene adipocyte plasma membrane associated protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067127.1 Chromosome 15 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic vesicle clustering IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in excitatory synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synapse differentiation-inducing gene protein 1
Names
synapse differentiation inducing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067127.1 Reference KAUST_Apoly_ChrSc

    Range
    38591528..38612195 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022213919.2 → XP_022069611.1  synapse differentiation-inducing gene protein 1

    UniProtKB/TrEMBL
    A0A3Q1FDN8
    Related
    ENSAPOP00000014012.1
    Conserved Domains (1) summary
    pfam04505
    Location:185 → 250
    CD225; Interferon-induced transmembrane protein
Nucleotide Protein
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