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esrrga estrogen-related receptor gamma a [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110956301, updated on 6-Jun-2024

Summary

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Gene symbol
esrrga
Gene description
estrogen-related receptor gamma a
See related
Ensembl:ENSAPOG00000008182
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Also known as
esrrg
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 2 NC_067114.1 (17246416..17401649, complement)

Chromosome 2 - NC_067114.1Genomic Context describing neighboring genes Neighboring gene potassium channel tetramerization domain containing 3 Neighboring gene Usher syndrome 2A (autosomal recessive, mild) Neighboring gene uncharacterized LOC127531177 Neighboring gene spermatogenesis associated 17 Neighboring gene growth regulating estrogen receptor binding 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067114.1 Chromosome 2 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear steroid receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
estrogen-related receptor gamma a
Names
estrogen related receptor gamma

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067114.1 Reference KAUST_Apoly_ChrSc

    Range
    17246416..17401649 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051939893.1 → XP_051795853.1  estrogen-related receptor gamma a isoform X5

    UniProtKB/TrEMBL
    A0A3Q1ERU8

  2. XM_051939886.1 → XP_051795846.1  estrogen-related receptor gamma a isoform X5

    UniProtKB/TrEMBL
    A0A3Q1ERU8

  3. XM_051939877.1 → XP_051795837.1  estrogen-related receptor gamma a isoform X3

    UniProtKB/TrEMBL
    A0A3Q1ERU8

  4. XM_051939869.1 → XP_051795829.1  estrogen-related receptor gamma a isoform X1

    UniProtKB/TrEMBL
    A0A3Q1ERU8

  5. XM_051939883.1 → XP_051795843.1  estrogen-related receptor gamma a isoform X5

    UniProtKB/TrEMBL
    A0A3Q1ERU8

  6. XM_022201674.2 → XP_022057366.1  estrogen-related receptor gamma a isoform X4

    UniProtKB/TrEMBL
    A0A3Q1ERU8
    Related
    ENSAPOP00000006327.1
    Conserved Domains (2) summary
    cd06946
    Location:293 → 512
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:178 → 274
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  7. XM_022201673.2 → XP_022057365.1  estrogen-related receptor gamma a isoform X2

    UniProtKB/TrEMBL
    A0A3Q1EQW9, A0A3Q1ERU8
    Related
    ENSAPOP00000006339.1
    Conserved Domains (2) summary
    cd06946
    Location:300 → 519
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:178 → 274
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers
Nucleotide Protein
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