U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

cpeb2 cytoplasmic polyadenylation element binding protein 2 [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110954801, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
cpeb2
Gene description
cytoplasmic polyadenylation element binding protein 2
See related
Ensembl:ENSAPOG00000023124
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 4
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 4 NC_067116.1 (34040925..34062023)

Chromosome 4 - NC_067116.1Genomic Context describing neighboring genes Neighboring gene neuron-derived neurotrophic factor Neighboring gene uncharacterized LOC127533607 Neighboring gene complement C1q tumor necrosis factor-related protein 7 Neighboring gene coiled-coil and C2 domain containing 2A

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_067116.1 Chromosome 4 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA 3'-UTR binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA regulatory element binding translation repressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation factor activity, RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of cytoplasmic translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cytoplasmic polyadenylation element-binding protein 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067116.1 Reference KAUST_Apoly_ChrSc

    Range
    34040925..34062023
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022199494.2 → XP_022055186.1  cytoplasmic polyadenylation element-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1FNA4, A0A3Q1GTJ3
    Related
    ENSAPOP00000034086.1
    Conserved Domains (3) summary
    cd12724
    Location:505 → 596
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:613 → 693
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:688 → 749
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

  2. XM_022199495.2 → XP_022055187.1  cytoplasmic polyadenylation element-binding protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1FNA4, A0A3Q1FQV7
    Related
    ENSAPOP00000019618.1
    Conserved Domains (3) summary
    cd12724
    Location:488 → 579
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:596 → 676
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:671 → 732
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

  3. XM_022199496.2 → XP_022055188.1  cytoplasmic polyadenylation element-binding protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A3Q1FNA4, A0A3Q1GTH6
    Related
    ENSAPOP00000034066.1
    Conserved Domains (3) summary
    cd12724
    Location:480 → 571
    RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    cd12726
    Location:588 → 668
    RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
    pfam16366
    Location:663 → 724
    CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.