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ercc2 excision repair cross-complementation group 2 [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110953875, updated on 15-Mar-2024

Summary

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Gene symbol
ercc2
Gene description
excision repair cross-complementation group 2
See related
Ensembl:ENSAPOG00000000375
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 13
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 13 NC_067125.1 (24807877..24821669)

Chromosome 13 - NC_067125.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110953872 Neighboring gene hypoxia inducible factor 1 subunit alpha, like Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene transfer RNA glutamic acid (anticodon CUC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067125.1 Chromosome 13 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair, DNA duplex unwinding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of mitotic recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
general transcription and DNA repair factor IIH helicase subunit XPD
Names
ERCC excision repair 2, TFIIH core complex helicase subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067125.1 Reference KAUST_Apoly_ChrSc

    Range
    24807877..24821669
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022198080.2 → XP_022053772.1  general transcription and DNA repair factor IIH helicase subunit XPD

    UniProtKB/TrEMBL
    A0A3Q1FXY5, A0A3Q1GGF0
    Related
    ENSAPOP00000011215.1
    Conserved Domains (1) summary
    TIGR00604
    Location:7 → 708
    rad3; DNA repair helicase (rad3)
Nucleotide Protein
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