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lgals3b lectin, galactoside binding soluble 3b [ Acanthochromis polyacanthus (spiny chromis) ]

Gene ID: 110953718, updated on 6-Jun-2024

Summary

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Gene symbol
lgals3b
Gene description
lectin, galactoside binding soluble 3b
See related
Ensembl:ENSAPOG00000018904
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthochromis polyacanthus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Acanthochromis
Also known as
lgals3
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_02 current KAUST_Apoly_ChrSc (GCF_021347895.1) 1 NC_067113.1 (35376587..35382661, complement)

Chromosome 1 - NC_067113.1Genomic Context describing neighboring genes Neighboring gene jumonji domain containing 7 Neighboring gene F-box protein 34 Neighboring gene dishevelled-binding antagonist of beta-catenin 1 Neighboring gene protein TALPID3 Neighboring gene interferon regulatory factor 2 binding protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067113.1 Chromosome 1 Reference KAUST_Apoly_ChrSc

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables IgE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables laminin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in eosinophil chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in macrophage chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monocyte chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of extrinsic apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neutrophil chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of calcium ion import IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in immunological synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galectin-3b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021347895.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference KAUST_Apoly_ChrSc

Genomic

  1. NC_067113.1 Reference KAUST_Apoly_ChrSc

    Range
    35376587..35382661 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051947486.1 → XP_051803446.1  galectin-3b isoform X2

  2. XM_051947483.1 → XP_051803443.1  galectin-3b isoform X1

    UniProtKB/TrEMBL
    A0A3Q1FFK6
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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