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LOC110828939 centaurin-gamma-1A [ Zootermopsis nevadensis ]

Gene ID: 110828939, updated on 10-May-2024

Summary

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Gene symbol
LOC110828939
Gene description
centaurin-gamma-1A
Locus tag
L798_05413
Gene type
protein coding
RefSeq status
MODEL
Organism
Zootermopsis nevadensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Polyneoptera; Dictyoptera; Blattodea; Blattoidea; Termitoidae; Termopsidae; Zootermopsis
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current ZooNev1.0 (GCF_000696155.1) Unplaced Scaffold NW_019059755.1 (26564..124062)

NW_019059755.1Genomic Context describing neighboring genes Neighboring gene clumping factor B-like Neighboring gene ubiquitin carboxyl-terminal hydrolase 36-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019059755 Unplaced Scaffold Reference ZooNev1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centaurin-gamma-1A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zootermopsis nevadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZooNev1.0 Primary Assembly

Genomic

  1. NW_019059755.1 Reference ZooNev1.0 Primary Assembly

    Range
    26564..124062
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022062155.1 → XP_021917847.1  centaurin-gamma-1A isoform X3

    UniProtKB/TrEMBL
    A0A067RLT8
    Conserved Domains (5) summary
    cd00204
    Location:706 → 785
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd01250
    Location:346 → 562
    PH_AGAP; Arf-GAP with GTPase, ANK repeat and PH domain-containing protein Pleckstrin homology (PH) domain
    sd00045
    Location:738 → 769
    ANK; ANK repeat [structural motif]
    pfam01412
    Location:582 → 692
    ArfGap; Putative GTPase activating protein for Arf
    cl21455
    Location:1 → 133
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  2. XM_022062153.1 → XP_021917845.1  centaurin-gamma-1A isoform X1

    UniProtKB/TrEMBL
    A0A067RLT8
    Conserved Domains (5) summary
    cd00204
    Location:705 → 784
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd01250
    Location:346 → 561
    PH_AGAP; Arf-GAP with GTPase, ANK repeat and PH domain-containing protein Pleckstrin homology (PH) domain
    sd00045
    Location:737 → 768
    ANK; ANK repeat [structural motif]
    pfam01412
    Location:581 → 691
    ArfGap; Putative GTPase activating protein for Arf
    cl21455
    Location:1 → 133
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  3. XM_022062156.1 → XP_021917848.1  centaurin-gamma-1A isoform X4

    Conserved Domains (4) summary
    cd00204
    Location:500 → 579
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd01250
    Location:140 → 356
    PH_AGAP; Arf-GAP with GTPase, ANK repeat and PH domain-containing protein Pleckstrin homology (PH) domain
    sd00045
    Location:532 → 563
    ANK; ANK repeat [structural motif]
    pfam01412
    Location:376 → 486
    ArfGap; Putative GTPase activating protein for Arf

  4. XM_022062157.1 → XP_021917849.1  centaurin-gamma-1A isoform X4

    Conserved Domains (4) summary
    cd00204
    Location:500 → 579
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd01250
    Location:140 → 356
    PH_AGAP; Arf-GAP with GTPase, ANK repeat and PH domain-containing protein Pleckstrin homology (PH) domain
    sd00045
    Location:532 → 563
    ANK; ANK repeat [structural motif]
    pfam01412
    Location:376 → 486
    ArfGap; Putative GTPase activating protein for Arf

  5. XM_022062154.1 → XP_021917846.1  centaurin-gamma-1A isoform X2

    Conserved Domains (4) summary
    cd00204
    Location:582 → 661
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd01250
    Location:222 → 438
    PH_AGAP; Arf-GAP with GTPase, ANK repeat and PH domain-containing protein Pleckstrin homology (PH) domain
    sd00045
    Location:614 → 645
    ANK; ANK repeat [structural motif]
    pfam01412
    Location:458 → 568
    ArfGap; Putative GTPase activating protein for Arf
Nucleotide Protein
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