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TLE6 TLE family member 6, subcortical maternal complex member [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110594074, updated on 15-Mar-2024

Summary

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Gene symbol
TLE6
Gene description
TLE family member 6, subcortical maternal complex member
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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See TLE6 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
16
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 1 NC_058403.1 (212366587..212376185, complement)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734403.1 (7932934..7942533, complement)

Chromosome 1 - NC_058403.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene TLE family member 2, transcriptional corepressor Neighboring gene zinc finger protein 555-like Neighboring gene zinc finger protein 77

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transducin-like enhancer protein 6
Names
transducin like enhancer of split 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058403.1 Reference ASM220157v2

    Range
    212366587..212376185 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021705523.1 → XP_021561198.1  transducin-like enhancer protein 6

    UniProtKB/TrEMBL
    A0A2Y9IB79
    Conserved Domains (3) summary
    sd00039
    Location:319 → 362
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:311 → 594
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    cl26386
    Location:93 → 213
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
Nucleotide Protein
Heading Accession and Version

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