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SRSF1 serine and arginine rich splicing factor 1 [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110592804, updated on 15-Mar-2024

Summary

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Gene symbol
SRSF1
Gene description
serine and arginine rich splicing factor 1
See related
EnsemblRapid:ENSNSCG00000011379
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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See SRSF1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
5
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 15 NC_058417.1 (27873733..27893670)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734400.1 (11530953..11535514, complement)

Chromosome 15 - NC_058417.1Genomic Context describing neighboring genes Neighboring gene dynein light chain LC8-type 2 Neighboring gene 60S ribosomal protein L37a-like Neighboring gene vascular endothelial zinc finger 1 Neighboring gene CUE domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/arginine-rich splicing factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058417.1 Reference ASM220157v2

    Range
    27873733..27893670
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021703949.2 → XP_021559624.1  serine/arginine-rich splicing factor 1 isoform X1

    UniProtKB/TrEMBL
    A0A2Y9IBD6
    Related
    ENSNSCP00000014003.1
    Conserved Domains (2) summary
    cd12597
    Location:12 → 90
    RRM1_SRSF1; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 1 (SRSF1) and similar proteins
    cd12767
    Location:113 → 196
    RRM2_SRSF1; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 1 (SRSF1) and similar proteins

  2. XM_044921422.1 → XP_044777357.1  serine/arginine-rich splicing factor 1 isoform X2

    UniProtKB/TrEMBL
    A0A8M1MU25
    Conserved Domains (2) summary
    cd12597
    Location:12 → 90
    RRM1_SRSF1; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 1 (SRSF1) and similar proteins
    cd12767
    Location:113 → 196
    RRM2_SRSF1; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 1 (SRSF1) and similar proteins

RNA

  1. XR_006541286.1 RNA Sequence

  2. XR_002481128.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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