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RET ret proto-oncogene [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110589447, updated on 11-Apr-2024

Summary

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Gene symbol
RET
Gene description
ret proto-oncogene
See related
EnsemblRapid:ENSNSCG00000012701
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
21
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 6 NC_058408.1 (117375119..117425104, complement)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734381.1 (29575679..29625130, complement)

Chromosome 6 - NC_058408.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110589545 Neighboring gene RasGEF domain family member 1A Neighboring gene chondroitin sulfate N-acetylgalactosaminyltransferase 2 Neighboring gene BMS1 ribosome biogenesis factor Neighboring gene zinc finger protein 883-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane receptor protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: proto-oncogene tyrosine-protein kinase receptor Ret

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058408.1 Reference ASM220157v2

    Range
    117375119..117425104 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021699972.1 → XP_021555647.1  LOW QUALITY PROTEIN: proto-oncogene tyrosine-protein kinase receptor Ret

    UniProtKB/TrEMBL
    A0A2Y9HVS1
    Related
    ENSNSCP00000015833.1, ENSNSCT00000017907.1
    Conserved Domains (2) summary
    cd05045
    Location:740 → 1029
    PTKc_RET; Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein
    pfam00028
    Location:188 → 277
    Cadherin; Cadherin domain
Nucleotide Protein
Heading Accession and Version

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