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RYBP RING1 and YY1 binding protein [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110585091, updated on 15-Mar-2024

Summary

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Gene symbol
RYBP
Gene description
RING1 and YY1 binding protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 1 NC_058403.1 (175709500..175786323)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734355.1 (19518699..19522436, complement)

Chromosome 1 - NC_058403.1Genomic Context describing neighboring genes Neighboring gene SHQ1, H/ACA ribonucleoprotein assembly factor Neighboring gene yrdC domain-containing protein, mitochondrial-like Neighboring gene small nucleolar RNA SNORA62/SNORA6 family Neighboring gene prokineticin 2 Neighboring gene G protein-coupled receptor 27

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RING1 and YY1-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058403.1 Reference ASM220157v2

    Range
    175709500..175786323
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044921190.1 → XP_044777125.1  RING1 and YY1-binding protein isoform X1

    UniProtKB/TrEMBL
    A0A8M1MV75
    Conserved Domains (3) summary
    sd00029
    Location:23 → 42
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam00641
    Location:20 → 43
    zf-RanBP; Zn-finger in Ran binding protein and others
    pfam17219
    Location:143 → 174
    YAF2_RYBP; Yaf2/RYBP C-terminal binding motif

  2. XM_044921193.1 → XP_044777128.1  RING1 and YY1-binding protein isoform X2

    UniProtKB/TrEMBL
    A0A8M1MV75
    Conserved Domains (3) summary
    sd00029
    Location:23 → 42
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam00641
    Location:20 → 43
    zf-RanBP; Zn-finger in Ran binding protein and others
    pfam17219
    Location:143 → 174
    YAF2_RYBP; Yaf2/RYBP C-terminal binding motif

  3. XM_044921194.1 → XP_044777129.1  RING1 and YY1-binding protein isoform X3

    UniProtKB/TrEMBL
    A0A8M1MYX2
    Conserved Domains (2) summary
    smart00547
    Location:21 → 43
    ZnF_RBZ; Zinc finger domain
    sd00029
    Location:23 → 42
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
Nucleotide Protein
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