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DST dystonin [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110582167, updated on 15-Mar-2024

Summary

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Gene symbol
DST
Gene description
dystonin
See related
EnsemblRapid:ENSNSCG00000006171
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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See DST in Genome Data Viewer
Location:
chromosome: 8
Exon count:
104
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 8 NC_058410.1 (94374322..94850476)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734341.1 (15544107..15801352, complement)

Chromosome 8 - NC_058410.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 451 Neighboring gene nucleophosmin-like Neighboring gene BEN domain containing 6 Neighboring gene plectin-like Neighboring gene eukaryotic translation initiation factor 1-like Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intermediate filament cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in wound healing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: dystonin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058410.1 Reference ASM220157v2

    Range
    94374322..94850476
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044917613.1 → XP_044773548.1  LOW QUALITY PROTEIN: dystonin

    UniProtKB/TrEMBL
    A0A8M1MLL3
    Conserved Domains (11) summary
    pfam05483
    Location:849 → 1481
    SCP-1; Synaptonemal complex protein 1 (SCP-1)
    smart00243
    Location:7496 → 7571
    GAS2; Growth-Arrest-Specific Protein 2 Domain
    TIGR00618
    Location:3447 → 4189
    sbcc; exonuclease SbcC
    smart00150
    Location:820 → 911
    SPEC; Spectrin repeats
    smart00250
    Location:1986 → 2022
    PLEC; Plectin repeat
    smart00935
    Location:1698 → 1767
    OmpH; Outer membrane protein (OmpH-like)
    COG1196
    Location:3830 → 4641
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5069
    Location:208 → 465
    SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
    cd00051
    Location:7421 → 7483
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    cd00176
    Location:6600 → 6814
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl02488
    Location:5325 → 5498
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
Nucleotide Protein
Heading Accession and Version

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