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CHMP2A charged multivesicular body protein 2A [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110581922, updated on 15-Mar-2024

Summary

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Gene symbol
CHMP2A
Gene description
charged multivesicular body protein 2A
See related
EnsemblRapid:ENSNSCG00000022505
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
6
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 16 NC_058418.1 (80926..83829)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734339.1 (54846..57736)

Chromosome 16 - NC_058418.1Genomic Context describing neighboring genes Neighboring gene myeloid zinc finger 1 Neighboring gene ubiquitin conjugating enzyme E2 M Neighboring gene tripartite motif containing 28 Neighboring gene zinc finger and BTB domain containing 45

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosome transport via multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in late endosome to vacuole transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
charged multivesicular body protein 2a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058418.1 Reference ASM220157v2

    Range
    80926..83829
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044911411.1 → XP_044767346.1  charged multivesicular body protein 2a

    UniProtKB/TrEMBL
    A0A2Y9H7D3
    Conserved Domains (1) summary
    pfam03357
    Location:17 → 185
    Snf7

  2. XM_021691848.1 → XP_021547523.1  charged multivesicular body protein 2a

    UniProtKB/TrEMBL
    A0A2Y9H7D3
    Related
    ENSNSCP00000028473.1, ENSNSCT00000032034.1
    Conserved Domains (1) summary
    pfam03357
    Location:17 → 185
    Snf7

  3. XM_044911410.1 → XP_044767345.1  charged multivesicular body protein 2a

    UniProtKB/TrEMBL
    A0A2Y9H7D3
    Conserved Domains (1) summary
    pfam03357
    Location:17 → 185
    Snf7
Nucleotide Protein
Heading Accession and Version

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