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Mtcl3 MTCL family member 3 [ Meriones unguiculatus (Mongolian gerbil) ]

Gene ID: 110563545, updated on 15-Mar-2024

Summary

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Gene symbol
Mtcl3
Gene description
MTCL family member 3
See related
EnsemblRapid:ENSMUGG00015014217
Gene type
protein coding
RefSeq status
MODEL
Organism
Meriones unguiculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Gerbillinae; Meriones
Also known as
Soga3
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_10 current Bangor_MerUng_6.1 (GCF_030254825.1) 20 NC_083367.1 (29089036..29140247)
100 previous assembly MunDraft-v1.0 (GCF_002204375.1) Unplaced Scaffold NW_018660081.1 (173696..224910)

Chromosome 20 - NC_083367.1Genomic Context describing neighboring genes Neighboring gene thymocyte selection associated Neighboring gene uncharacterized LOC110566479 Neighboring gene ubiquitin-conjugating enzyme E2 E1-like Neighboring gene chromosome 20 C6orf58 homolog Neighboring gene KIAA0408 ortholog Neighboring gene uncharacterized LOC132649472

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein SOGA3
Names
SOGA family member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030254825.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bangor_MerUng_6.1

Genomic

  1. NC_083367.1 Reference Bangor_MerUng_6.1

    Range
    29089036..29140247
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060373503.1 → XP_060229486.1  protein SOGA3 isoform X2

  2. XM_021660677.2 → XP_021516352.1  protein SOGA3 isoform X1

    Related
    ENSMUGP00015019479.1, ENSMUGT00015025758.1
    Conserved Domains (2) summary
    pfam11365
    Location:522 → 616
    SOGA; Protein SOGA
    cl25732
    Location:325 → 716
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein Strain
Heading Accession and Version

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