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firrm fignl1 interacting regulator of recombination and mitosis [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110523053, updated on 15-Mar-2024

Summary

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Gene symbol
firrm
Gene description
fignl1 interacting regulator of recombination and mitosis
See related
Ensembl:ENSOMYG00000014441
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Also known as
c5h1orf112
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 5
Exon count:
25
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 5 NC_048569.1 (94145444..94164607)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 5 NC_035081.1 (90139826..90158217)

Chromosome 5 - NC_048569.1Genomic Context describing neighboring genes Neighboring gene E-selectin Neighboring gene 14 kDa phosphohistidine phosphatase Neighboring gene SCY1-like, kinase-like 3 Neighboring gene P-selectin-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein C1orf112 homolog
Names
chromosome 5 C1orf112 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048569.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    94145444..94164607
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036978886.1 → XP_036834781.1  uncharacterized protein C1orf112 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C7Q2U2, A0A8K9XN57
    Related
    ENSOMYP00000030862.2, ENSOMYT00000033650.2
    Conserved Domains (1) summary
    pfam14868
    Location:226 → 779
    DUF4487; Domain of unknown function (DUF4487)

  2. XM_036978887.1 → XP_036834782.1  uncharacterized protein C1orf112 homolog isoform X2

    UniProtKB/TrEMBL
    A0A8K9XN57
    Conserved Domains (1) summary
    pfam14868
    Location:226 → 777
    DUF4487; Domain of unknown function (DUF4487)

  3. XM_036978888.1 → XP_036834783.1  uncharacterized protein C1orf112 homolog isoform X3

    UniProtKB/TrEMBL
    A0A8C7PZU4
    Conserved Domains (1) summary
    pfam14868
    Location:216 → 769
    DUF4487; Domain of unknown function (DUF4487)

  4. XM_036978885.1 → XP_036834780.1  uncharacterized protein C1orf112 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C7Q2U2, A0A8K9XN57
    Conserved Domains (1) summary
    pfam14868
    Location:226 → 779
    DUF4487; Domain of unknown function (DUF4487)
Nucleotide Protein
Heading Accession and Version

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