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LRRC43 leucine rich repeat containing 43 [ Lonchura striata (white-rumped munia) ]

Gene ID: 110478128, updated on 14-Aug-2024

Summary

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Gene symbol
LRRC43
Gene description
leucine rich repeat containing 43
Locus tag
RLOC_00014397
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
12
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 15 NC_042581.1 (11111299..11118307, complement)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018657119.1 (99693..103733)

Chromosome 15 - NC_042581.1Genomic Context describing neighboring genes Neighboring gene diablo IAP-binding mitochondrial protein Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 Neighboring gene MLX interacting protein Neighboring gene BAF chromatin remodeling complex subunit BCL7A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat-containing protein 43
Names
Leucine-rich repeat-containing protein 43

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042581.1 Reference lonStrDom2 Primary Assembly

    Range
    11111299..11118307 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031506209.1 → XP_031362069.1  leucine-rich repeat-containing protein 43

    UniProtKB/TrEMBL
    A0A218V5F0
    Conserved Domains (2) summary
    COG4886
    Location:76 → 243
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00031
    Location:129 → 149
    LRR_1; leucine-rich repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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