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TTLL1 TTL family tubulin polyglutamylase complex subunit L1 [ Lonchura striata (white-rumped munia) ]

Gene ID: 110473179, updated on 14-Aug-2024

Summary

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Gene symbol
TTLL1
Gene description
TTL family tubulin polyglutamylase complex subunit L1
Locus tag
RLOC_00014017
See related
Ensembl:ENSLSDG00000004671
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1A
Exon count:
10
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 1A NC_042566.1 (68630171..68646414, complement)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018656459.1 (71788..88028, complement)

Chromosome 1A - NC_042566.1Genomic Context describing neighboring genes Neighboring gene protein kinase C and casein kinase substrate in neurons 2 Neighboring gene uncharacterized LOC110473195 Neighboring gene malonyl-CoA-acyl carrier protein transacylase Neighboring gene translocator protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tubulin-glutamic acid ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyglutamylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable tubulin polyglutamylase TTLL1
Names
putative tubulin polyglutamylase TTLL1
tubulin tyrosine ligase like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042566.1 Reference lonStrDom2 Primary Assembly

    Range
    68630171..68646414 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021535493.2 → XP_021391168.1  probable tubulin polyglutamylase TTLL1

    UniProtKB/TrEMBL
    A0A218UKQ1
    Related
    ENSLSDP00000006094.1
    Conserved Domains (1) summary
    pfam03133
    Location:59 → 364
    TTL; Tubulin-tyrosine ligase family
Nucleotide Protein
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