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CCDC174 coiled-coil domain containing 174 [ Lonchura striata (white-rumped munia) ]

Gene ID: 110471202, updated on 14-Aug-2024

Summary

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Gene symbol
CCDC174
Gene description
coiled-coil domain containing 174
Locus tag
RLOC_00009702
See related
Ensembl:ENSLSDG00000009635
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
11
Annotation release Status Assembly Chr Location
101 current lonStrDom2 (GCF_005870125.1) 12 NC_042578.1 (11404211..11416064)
100 previous assembly LonStrDom1 (GCF_002197715.1) Unplaced Scaffold NW_018654729.1 (1726899..1738756, complement)

Chromosome 12 - NC_042578.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110471393 Neighboring gene solute carrier family 6 member 6 Neighboring gene glutamate receptor interacting protein 2 Neighboring gene uncharacterized LOC116184103 Neighboring gene uncharacterized LOC110471388 Neighboring gene coiled-coil domain containing 51

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by GO

Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coiled-coil domain-containing protein 174
Names
Coiled-coil domain-containing protein 174

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lonchura striata domestica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042578.1 Reference lonStrDom2 Primary Assembly

    Range
    11404211..11416064
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021531600.2 → XP_021387275.1  coiled-coil domain-containing protein 174

    UniProtKB/TrEMBL
    A0A218VC04
    Related
    ENSLSDP00000013241.1
    Conserved Domains (3) summary
    pfam11029
    Location:495 → 600
    DAZAP2; DAZ associated protein 2 (DAZAP2)
    pfam13300
    Location:219 → 301
    DUF4078; Domain of unknown function (DUF4078)
    cl26511
    Location:19 → 387
    Neuromodulin_N; Gap junction protein N-terminal region
Nucleotide Protein
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