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CCN5 cellular communication network factor 5 [ Lonchura striata (white-rumped munia) ]

Gene ID: 110469301, updated on 24-Sep-2024

Summary

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Gene symbol
CCN5
Gene description
cellular communication network factor 5
Locus tag
RLOC_00011182
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Also known as
WISP2
Orthologs
human mouse all
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Genomic context

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See CCN5 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_09 current lonStrDom2 (GCF_005870125.1) 20 NC_042585.1 (14231433..14236731, complement)

Chromosome 20 - NC_042585.1Genomic Context describing neighboring genes Neighboring gene potassium two pore domain channel subfamily K member 15 Neighboring gene P2Y purinoceptor 1 Neighboring gene adenosine deaminase Neighboring gene cAMP-dependent protein kinase inhibitor gamma

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042585.1 Chromosome 20 Reference lonStrDom2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables heparin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CCN family member 5
Names
WNT1 inducible signaling pathway protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_005870125.1-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042585.1 Reference lonStrDom2 Primary Assembly

    Range
    14231433..14236731 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031506528.1 → XP_031362388.1  CCN family member 5

    UniProtKB/TrEMBL
    A0A218URK9
    Conserved Domains (2) summary
    cl17735
    Location:110 → 170
    VWC; von Willebrand factor type C domain
    pfam00219
    Location:32 → 88
    IGFBP; Insulin-like growth factor binding protein
Nucleotide Protein
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