U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Adamts18 ADAM metallopeptidase with thrombospondin type 1 motif 18 [ Mus pahari (shrew mouse) ]

Gene ID: 110337278, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Adamts18
Gene description
ADAM metallopeptidase with thrombospondin type 1 motif 18
See related
Ensembl:MGP_PahariEiJ_G0023191
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 20
Exon count:
23
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 20 NC_034609.1 (36963365..37114621, complement)

Chromosome 20 - NC_034609.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110337212 Neighboring gene U1 spliceosomal RNA Neighboring gene synaptonemal complex central element protein 1 like Neighboring gene MON1 homolog B, secretory trafficking associated Neighboring gene nudix hydrolase 7 Neighboring gene vesicle amine transport 1 like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_034609.1 Chromosome 20 Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
A disintegrin and metalloproteinase with thrombospondin motifs 18

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034609.1 Reference PAHARI_EIJ_v1.1

    Range
    36963365..37114621 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021220096.1 → XP_021075755.1  A disintegrin and metalloproteinase with thrombospondin motifs 18

    Related
    MGP_PahariEiJ_P0054370, MGP_PahariEiJ_T0054370.1
    Conserved Domains (6) summary
    smart00209
    Location:592 → 644
    TSP1; Thrombospondin type 1 repeats
    cd04273
    Location:293 → 494
    ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
    pfam01562
    Location:65 → 203
    Pep_M12B_propep; Reprolysin family propeptide
    pfam05986
    Location:749 → 861
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam08686
    Location:1186 → 1216
    PLAC; PLAC (protease and lacunin) domain
    pfam17771
    Location:511 → 578
    ADAM_CR_2; ADAM cysteine-rich domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.