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Otulin OTU deubiquitinase with linear linkage specificity [ Mus pahari (shrew mouse) ]

Gene ID: 110329034, updated on 15-Mar-2024

Summary

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Gene symbol
Otulin
Gene description
OTU deubiquitinase with linear linkage specificity
See related
Ensembl:MGP_PahariEiJ_G0016078
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
7
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 11 NC_034600.1 (72275919..72301557, complement)

Chromosome 11 - NC_034600.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA17 Neighboring gene ANKH inorganic pyrophosphate transport regulator Neighboring gene 40S ribosomal protein S15a pseudogene Neighboring gene OTU deubiquitinase with linear linkage specificity like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034600.1 Chromosome 11 Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein linear deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin thioesterase otulin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034600.1 Reference PAHARI_EIJ_v1.1

    Range
    72275919..72301557 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021208579.2 → XP_021064238.1  ubiquitin thioesterase otulin isoform X1

    Related
    MGP_PahariEiJ_P0027469, MGP_PahariEiJ_T0027469.1
    Conserved Domains (1) summary
    pfam16218
    Location:81 → 344
    Peptidase_C101; Peptidase family C101

  2. XM_029544123.1 → XP_029399983.1  ubiquitin thioesterase otulin isoform X2

    Conserved Domains (1) summary
    pfam16218
    Location:11 → 274
    Peptidase_C101; Peptidase family C101
Nucleotide Protein
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