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Gdpd5 glycerophosphodiester phosphodiesterase domain containing 5 [ Mus pahari (shrew mouse) ]

Gene ID: 110319948, updated on 15-Mar-2024

Summary

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Gene symbol
Gdpd5
Gene description
glycerophosphodiester phosphodiesterase domain containing 5
See related
Ensembl:MGP_PahariEiJ_G0013248
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
21
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 1 NC_034590.1 (70213012..70293786)

Chromosome 1 - NC_034590.1Genomic Context describing neighboring genes Neighboring gene microtubule associated protein 6 Neighboring gene serpin family H member 1 Neighboring gene small nucleolar RNA SNORD15 Neighboring gene kelch like family member 35 Neighboring gene ribosomal protein S3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034590.1 Chromosome 1 Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycerophosphodiester phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycerophosphodiester phosphodiesterase domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034590.1 Reference PAHARI_EIJ_v1.1

    Range
    70213012..70293786
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021195708.1 → XP_021051367.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X2

    Related
    MGP_PahariEiJ_P0017671, MGP_PahariEiJ_T0017671.1
    Conserved Domains (1) summary
    cl14615
    Location:227 → 576
    PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

  2. XM_029543735.1 → XP_029399595.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

    Related
    MGP_PahariEiJ_P0017670, MGP_PahariEiJ_T0017670.1
    Conserved Domains (1) summary
    cl14615
    Location:227 → 581
    PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

  3. XM_029543736.1 → XP_029399596.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

    Conserved Domains (1) summary
    cl14615
    Location:227 → 581
    PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

  4. XM_029543739.1 → XP_029399599.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

    Conserved Domains (1) summary
    cl14615
    Location:227 → 581
    PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

  5. XM_029543743.1 → XP_029399603.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

    Conserved Domains (1) summary
    cl14615
    Location:227 → 581
    PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily
Nucleotide Protein
Heading Accession and Version

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