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Utp15 UTP15 small subunit processome component [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110307892, updated on 15-Mar-2024

Summary

Gene symbol
Utp15
Gene description
UTP15 small subunit processome component
See related
Ensembl:MGP_CAROLIEiJ_G0018818
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
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Genomic context

Location:
chromosome: 13
Exon count:
13
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 13 NC_034582.1 (91883822..91899618, complement)

Chromosome 13 - NC_034582.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA40 Neighboring gene Rho guanine nucleotide exchange factor 28 Neighboring gene small nucleolar RNA SNORA48 Neighboring gene ankyrin repeat family A member 2 Neighboring gene calcium-binding and coiled-coil domain-containing protein 2-like

Genomic regions, transcripts, and products

Genomic Sequence:
NC_034582.1 Chromosome 13 Reference CAROLI_EIJ_v1.1 Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase I IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
U3 small nucleolar RNA-associated protein 15 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034582.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    91883822..91899618 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021180147.2XP_021035806.1  U3 small nucleolar RNA-associated protein 15 homolog

    UniProtKB/TrEMBL
    A0A6P5R1R7
    Related
    MGP_CAROLIEiJ_P0035229, MGP_CAROLIEiJ_T0035229.1
    Conserved Domains (3) summary
    cd00200
    Location:39276
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:4178
    7WD40; WD40 repeat [structural motif]
    pfam09384
    Location:343490
    UTP15_C; UTP15 C terminal