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Psma3 proteasome 20S subunit alpha 3 [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110306779, updated on 15-Mar-2024

Summary

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Gene symbol
Psma3
Gene description
proteasome 20S subunit alpha 3
See related
Ensembl:MGP_CAROLIEiJ_G0017823
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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See Psma3 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
11
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 12 NC_034581.1 (65619522..65638790)

Chromosome 12 - NC_034581.1Genomic Context describing neighboring genes Neighboring gene actin related protein 10 Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene uncharacterized LOC110306781 Neighboring gene AT-rich interaction domain 4A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034581.1 Chromosome 12 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex, alpha-subunit complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proteasome subunit alpha type-3
Names
proteasome subunit alpha 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034581.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    65619522..65638790
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021178877.2 → XP_021034536.1  proteasome subunit alpha type-3 isoform X1

    UniProtKB/TrEMBL
    A0A6P5QLH7
    Related
    MGP_CAROLIEiJ_P0032468, MGP_CAROLIEiJ_T0032468.1
    Conserved Domains (1) summary
    cd03751
    Location:5 → 217
    proteasome_alpha_type_3; The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming ...

  2. XM_029484879.1 → XP_029340739.1  proteasome subunit alpha type-3 isoform X2

    UniProtKB/TrEMBL
    A0A6P7RRM1
    Conserved Domains (1) summary
    cl00467
    Location:1 → 142
    Ntn_hydrolase; The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are activated autocatalytically via an N-terminally lcated nucleophilic amino acid. N-terminal nucleophile (NTN-) hydrolase superfamily, which contains a ...
Nucleotide Protein
Heading Accession and Version

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