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Arhgap42 Rho GTPase activating protein 42 [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110301193, updated on 15-Mar-2024

Summary

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Gene symbol
Arhgap42
Gene description
Rho GTPase activating protein 42
See related
Ensembl:MGP_CAROLIEiJ_G0031770
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
25
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 9 NC_034578.1 (5122704..5369754, complement)

Chromosome 9 - NC_034578.1Genomic Context describing neighboring genes Neighboring gene transient receptor potential cation channel subfamily C member 6 Neighboring gene uncharacterized LOC110301687 Neighboring gene progesterone receptor Neighboring gene U7 small nuclear RNA Neighboring gene protein cornichon homolog 4 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034578.1 Chromosome 9 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rho GTPase-activating protein 42

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034578.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    5122704..5369754 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029481163.1 → XP_029337023.1  rho GTPase-activating protein 42

    UniProtKB/TrEMBL
    A0A6P7R792
    Conserved Domains (4) summary
    cd07634
    Location:19 → 225
    BAR_GAP10-like; The Bin/Amphiphysin/Rvs (BAR) domain of Rho GTPase activating protein 10-like
    cd12066
    Location:821 → 875
    SH3_GRAF3; Src Homology 3 domain of GTPase Regulator Associated with Focal adhesion kinase 3
    cd01249
    Location:267 → 376
    BAR-PH_GRAF_family; GTPase Regulator Associated with Focal adhesion and related proteins Pleckstrin homology (PH) domain
    cl02570
    Location:369 → 567
    RhoGAP; GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when bound to ...

  2. XM_021171512.2 → XP_021027171.1  rho GTPase-activating protein 42

    UniProtKB/TrEMBL
    A0A6P7R792
    Related
    MGP_CAROLIEiJ_P0086697, MGP_CAROLIEiJ_T0086697.1
    Conserved Domains (4) summary
    cd07634
    Location:19 → 225
    BAR_GAP10-like; The Bin/Amphiphysin/Rvs (BAR) domain of Rho GTPase activating protein 10-like
    cd12066
    Location:821 → 875
    SH3_GRAF3; Src Homology 3 domain of GTPase Regulator Associated with Focal adhesion kinase 3
    cd01249
    Location:267 → 376
    BAR-PH_GRAF_family; GTPase Regulator Associated with Focal adhesion and related proteins Pleckstrin homology (PH) domain
    cl02570
    Location:369 → 567
    RhoGAP; GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when bound to ...
Nucleotide Protein
Heading Accession and Version

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