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Tprn taperin [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110289587, updated on 15-Mar-2024

Summary

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Gene symbol
Tprn
Gene description
taperin
See related
Ensembl:MGP_CAROLIEiJ_G0023261
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 2 NC_034571.1 (21158154..21165406)

Chromosome 2 - NC_034571.1Genomic Context describing neighboring genes Neighboring gene NADPH dependent diflavin oxidoreductase 1 Neighboring gene transmembrane protein 203 Neighboring gene SS nuclear autoantigen 1 Neighboring gene anaphase promoting complex subunit 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034571.1 Chromosome 2 Reference CAROLI_EIJ_v1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in auditory receptor cell stereocilium organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sensory perception of sound IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in stereocilium maintenance IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in stereocilium base IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
taperin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034571.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    21158154..21165406
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021155869.1 → XP_021011528.1  taperin

    UniProtKB/TrEMBL
    A0A6P5PAZ3
    Related
    MGP_CAROLIEiJ_P0050085, MGP_CAROLIEiJ_T0050085.1
    Conserved Domains (3) summary
    pfam13914
    Location:506 → 644
    Phostensin; Phostensin PP1-binding and SH3-binding region
    pfam13916
    Location:8 → 89
    Phostensin_N; PP1-regulatory protein, Phostensin N-terminal
    cl26464
    Location:109 → 321
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

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